logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000201_3|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000000201_00876
Non-reducing end alpha-L-arabinofuranosidase BoGH43A
CAZyme 18242 19810 - GH43| GH43_12
MGYG000000201_00877
hypothetical protein
null 19897 20667 - Polysacc_deac_1
MGYG000000201_00878
hypothetical protein
CAZyme 20672 22771 - GH3
MGYG000000201_00879
L-arabinose transport system permease protein AraQ
TC 22804 23649 - 3.A.1.1.18
MGYG000000201_00880
Lactose transport system permease protein LacF
TC 23662 24549 - 3.A.1.1.11
MGYG000000201_00881
hypothetical protein
TC 24629 25921 - 3.A.1.1.44
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is xylan

Protein ID eCAMI subfam CAZyme substrate
MGYG000000201_00876 GH43_e51|3.2.1.55|3.2.1.37 xylan
MGYG000000201_00878 GH3_e159|3.2.1.55|3.2.1.37|3.2.1.21|3.2.1.- xylan|beta-glucan|arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig


Genomic location